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Computing WSBM conditional marginals with Tensor-Train decomposition

Binary marginals Weighted Stochastic Block Model Variables separation Tensor-Train format low rank approximation TT matrices

HUMESS: Integrating Quantitative Transcriptomic Analysis and Metabolic Modeling to Unveil Condition-Specific Gene Signatures

metabolic networks modeling Transcriptomics gene signature

Planetary-scale heterotrophic microbial community modeling assesses metabolic synergy and viral impacts

Escobase and AcR: Escherichia coli databases of genomes and acid resistance genes from isolates from cattle farms

Escherichia coli cattle genome database acid-resistance genes

GrAnnoT, a tool for efficient and reliable annotation transfer through pangenome graph

pangénome graph annotation transfer

Promiscuous structural cross-compatibilities between major shell components of Klebsiella pneumoniae bacterial microcompartments

A Receptor Like Cytoplasmic Kinase evolved in Aeschynomene legumes to mediate Nod-independent rhizobial symbiosis

Symbiosis Legume Aeschynomene RLCK Signaling Nodulation

A roadmap for the adoption of pangenomics in agronomy

pangenome graphs agronomy algorithm pangenome graphs agronomy algorithm

metagWGS, a comprehensive workflow to analyze metagenomic data using Illumina or PacBio HiFi reads